Maintenance
Thu, 22 Aug 2024 11:18

Disruption to ENA Submissions

Owing to a scheduled cluster downtime and maintenance at European Nucleotide Archive (ENA), all ENA submissions will be paused between Monday 19th August, 2024 and Thursday 22nd August, 2024.

Submissions will resume on Friday 23rd August, 2024.

Apologies for the disruption.

Feature
Mon, 29 Jul 2024 17:09

COPO Integrates RO-Crate for Streamlined Research…

The COPO (Collaborative OPen Omics) platform has taken a significant step forward by integrating Research Object Crate (RO-Crate) into its metadata brokering platform for all submitted samples. This integration aims to enhance the organisation, packaging, and sharing of research data, providing a more efficient and standardised approach for researchers and data stewards alike.

RO-Crate i…

Feature
Mon, 29 Jul 2024 17:09

Introducing the New COPO Website: Refactored, Red…

We are thrilled to unveil the newly refactored and redesigned COPO project website, complete with a fresh logo and an updated codebase. The revamped site offers an improved user experience, featuring a sleek design and enhanced functionality.

Explore the new features and discover how COPO continues to support the scientific community with cutting-edge tools and resources.

Feature
Mon, 29 Jul 2024 17:09

Access Submission Accession Numbers Easily with C…

COPO now allows researchers to view accession numbers for their submissions, streamlining the process for analysis and publications. These accession numbers are critical for referencing in scholarly articles and ensuring reproducibility in research, enhancing the integrity and visibility of your work.
Feature
Mon, 29 Jul 2024 17:09

COPO Enhances Tree of Life Projects with Expanded…

Tree of Life (ToL) projects brokered through COPO can now process reads, sequencing annotations and assemblies more efficiently than ever.

This advancement supports comprehensive analysis and accelerates research timelines, providing researchers with robust tools to delve deeper into life science and biodiversity research.

See our Read more

Feature
Mon, 29 Jul 2024 17:09

Track Your ENA File Processing Status with COPO

Researchers, metadata providers and metadata submitters can now seamlessly track the status of data file submissions after COPO deposits them to European Nucleotide Archive (ENA) after the data files have been submitted through COPO.

After having uploaded data files and completed metadata submissions in COPO, stay infor…

General
Mon, 29 Jul 2024 17:09

COPO Welcomes New Project Group Leader

We are excited to announce the appointment of our new project group leader, Professor Irene Papatheodorou. Irene will be leading a group of skilled data-led scientists as the Head of Data Science at the Earlham Institute, in Norwich, United Kingdom.

General
Mon, 29 Jul 2024 17:09

COPO Achieves Milestone with Over 60,000 Samples …

As of 8th October, 2024, the Collaborative OPen Omics (COPO) project has successfully brokered an impressive 62,445 samples, underscoring its role as a key player in the research community. 

Earlier, as of 3rd July, 2024, the COPO project had brokered 59,521 samples.

These milestones reflect COPO's commitment to fac…

General
Mon, 29 Jul 2024 17:09

COPO Successfully Brokers Major Projects such as …

Demonstrating its pivotal role in the scientific community, the Collaborative OPen Omics (COPO) platform has brokered significant projects such as Aquatic Symbiosis Genomics (ASG), Darwin Tree of Life (DToL), European Reference Genome Atlas (ERGA) and various genomics metadata. These projects, supported by COPO's robust infrastructure and expertise, promise to drive forward crucial research and c…
General
Mon, 29 Jul 2024 17:09

COPO Streamlines Files Submission with User-Frien…

Simplifying the complexities of data submission, COPO introduces an intuitive files submission process designed to save researchers time and effort. This new system ensures that all data is uploaded accurately and efficiently, providing a seamless experience that allows scientists to focus more on their research and less on administrative tasks.
General
Mon, 29 Jul 2024 17:09

COPO Revolutionises Research with Innovative Publ…

The Collaborative OPen Omics (COPO) project continues to lead the way in research dissemination by publishing groundbreaking papers that enhance the scientific community's understanding of various biological processes. These publications not only offer new insights but also set a new standard for research excellence, ensuring that the latest scientific discoveries are shared promptly and widely.
General
Mon, 29 Jul 2024 17:09

COPO Enhances User Support with New Frequently As…

In an effort to improve user support and accessibility, the Collaborative OPen Omics (COPO) initiative has launched a comprehensive Frequently Asked Questions (FAQ) section on its website.

This new resource addresses common queries and provides detailed answers on topics ranging from account setup to d…

General
Mon, 29 Jul 2024 17:09

Celebrating a Decade of Innovation: COPO Marks it…

The Collaborative OPen Omics (COPO) project is celebrating its 10-year anniversary on 14th September, 2024, marking a decade of advancements in the field of biodiversity research.

Over the past ten years, COPO has become an indispensable tool for researchers worldwide, facilitating data sharing and collaboration across institutions.

To commemorate this milestone, COPO might host e…

General
Mon, 29 Jul 2024 17:09

Comprehensive Documentation for COPO Now Available

The Collaborative OPen Omics (COPO) project now has extensive documentation aimed at enhancing user experience, website usability and accessibility.

The documentation covers all aspects of COPO's functionalities, from metadata submissions, data file submissions, permit submissions and image submissions, to advanced features, providing a valuable resource for researchers and scientists in…

Feature
Mon, 29 Jul 2024 17:09

Customisation of Locus Tags for Data Submission

You can now customise a locus tag on the Collaborative OPen Omics (COPO) platform. Locus tags, according to the definition by European Nucleotide Archive (ENA), are identifiers applied systematically to every gene in a sequencing project.

The customisation of locus tags in COPO…

General
Mon, 29 Jul 2024 17:09

Continued Website Development and User Support

The Collaborative OPen Omics (COPO) project is currently being funded by the following:
  • Biotechnology and Biological Sciences Research Council (BBSRC), part of UK Research and Innovation, through the Cellular Genomics (CELLGEN) Grant BBS/E/ER/230001A
  • Data Infrastructure and Algorithms Group Grant EI-G-Data
  • Decoding Biodiversity (DECODE): Development of Novel Experimental …
Feature
Mon, 29 Jul 2024 17:09

Manifest version v2.5 Release

Equally, the projects - Aquatic Symbiosis Genomics (ASG), European Reference Genome Atlas (ERGA) and Darwin Tree of Life (DToL), which are brokered through COPO, have been updated to the latest manifest version 2.5.
Maintenance
Mon, 29 Jul 2024 17:09

Maintenance of COPO Project's Website

All Collaborative OPen Omics (COPO) services were disrupted for about 2 weeks in May, 2024 due to a technical issue.

Please accept our apologies for any inconvenience that the disruption may have caused.